Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.05■□□□□ 0.8
TOP1P11387 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.05■□□□□ 0.8
TOP1P11387 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.05■□□□□ 0.8
TOP1P11387 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.05■□□□□ 0.8
TOP1P11387 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TOP1P11387 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.05■□□□□ 0.8
TOP1P11387 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TOP1P11387 AC093525.9-201ENST00000624961 1746 ntBASIC20.05■□□□□ 0.8
TOP1P11387 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TOP1P11387 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.04■□□□□ 0.8
TOP1P11387 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.04■□□□□ 0.8
TOP1P11387 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 EGFEM1P-202ENST00000431685 1563 ntBASIC20.04■□□□□ 0.8
TOP1P11387 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.04■□□□□ 0.8
TOP1P11387 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.04■□□□□ 0.8
TOP1P11387 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.04■□□□□ 0.8
TOP1P11387 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.04■□□□□ 0.8
TOP1P11387 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.04■□□□□ 0.8
TOP1P11387 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TOP1P11387 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.04■□□□□ 0.8
TOP1P11387 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.04■□□□□ 0.8
TOP1P11387 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.04■□□□□ 0.8
TOP1P11387 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.04■□□□□ 0.8
TOP1P11387 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TOP1P11387 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.04■□□□□ 0.8
TOP1P11387 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TOP1P11387 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.03■□□□□ 0.8
TOP1P11387 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.03■□□□□ 0.8
TOP1P11387 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 AC087163.2-201ENST00000457299 853 ntBASIC20.03■□□□□ 0.8
TOP1P11387 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 AC040169.1-201ENST00000565382 521 ntBASIC20.03■□□□□ 0.8
TOP1P11387 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.03■□□□□ 0.8
TOP1P11387 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.03■□□□□ 0.8
TOP1P11387 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TOP1P11387 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TOP1P11387 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.02■□□□□ 0.8
TOP1P11387 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.02■□□□□ 0.8
TOP1P11387 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.8
TOP1P11387 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.02■□□□□ 0.8
TOP1P11387 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.02■□□□□ 0.8
TOP1P11387 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TOP1P11387 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
TOP1P11387 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TOP1P11387 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 SLC25A6P2-201ENST00000497974 877 ntBASIC20.02■□□□□ 0.8
TOP1P11387 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.02■□□□□ 0.8
TOP1P11387 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.02■□□□□ 0.8
TOP1P11387 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TOP1P11387 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms