Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 MCCD1P2-201ENST00000423228 335 ntBASIC20.4■□□□□ 0.86
POLR3DP05423 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.4■□□□□ 0.86
POLR3DP05423 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.4■□□□□ 0.86
POLR3DP05423 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
POLR3DP05423 BCAR1-209ENST00000546196 1340 ntBASIC20.4■□□□□ 0.86
POLR3DP05423 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR3DP05423 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
POLR3DP05423 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
POLR3DP05423 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
POLR3DP05423 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR3DP05423 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR3DP05423 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR3DP05423 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
POLR3DP05423 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
POLR3DP05423 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR3DP05423 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.39■□□□□ 0.86
POLR3DP05423 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR3DP05423 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR3DP05423 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
POLR3DP05423 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.39■□□□□ 0.86
POLR3DP05423 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
POLR3DP05423 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR3DP05423 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR3DP05423 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR3DP05423 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
POLR3DP05423 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR3DP05423 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR3DP05423 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR3DP05423 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR3DP05423 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR3DP05423 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
POLR3DP05423 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR3DP05423 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR3DP05423 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR3DP05423 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
POLR3DP05423 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR3DP05423 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
POLR3DP05423 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 AL138688.1-201ENST00000624851 1594 ntBASIC20.38■□□□□ 0.85
POLR3DP05423 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR3DP05423 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
POLR3DP05423 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
POLR3DP05423 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 CXCL1P1-201ENST00000502804 216 ntBASIC20.38■□□□□ 0.85
POLR3DP05423 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.38■□□□□ 0.85
POLR3DP05423 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.38■□□□□ 0.85
POLR3DP05423 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR3DP05423 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR3DP05423 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.38■□□□□ 0.85
POLR3DP05423 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
POLR3DP05423 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.37■□□□□ 0.85
POLR3DP05423 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
POLR3DP05423 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
POLR3DP05423 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
POLR3DP05423 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
POLR3DP05423 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
POLR3DP05423 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
POLR3DP05423 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.37■□□□□ 0.85
POLR3DP05423 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
POLR3DP05423 RHOQP3-201ENST00000437982 621 ntBASIC20.37■□□□□ 0.85
POLR3DP05423 AC087163.2-201ENST00000457299 853 ntBASIC20.37■□□□□ 0.85
POLR3DP05423 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.37■□□□□ 0.85
POLR3DP05423 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.37■□□□□ 0.85
POLR3DP05423 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.37■□□□□ 0.85
POLR3DP05423 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 AC007064.4-201ENST00000637740 555 ntBASIC20.37■□□□□ 0.85
POLR3DP05423 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.37■□□□□ 0.85
POLR3DP05423 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 AL023806.1-201ENST00000603994 1649 ntBASIC20.37■□□□□ 0.85
POLR3DP05423 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR3DP05423 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms