Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 AC005593.1-201ENST00000624894 515 ntBASIC13.21□□□□□ -0.29
TRBV12-3P01733 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV12-3P01733 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV12-3P01733 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.21□□□□□ -0.3
TRBV12-3P01733 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV12-3P01733 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV12-3P01733 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV12-3P01733 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV12-3P01733 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV12-3P01733 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.21□□□□□ -0.3
TRBV12-3P01733 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV12-3P01733 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.21□□□□□ -0.3
TRBV12-3P01733 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV12-3P01733 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.3
TRBV12-3P01733 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TRBV12-3P01733 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV12-3P01733 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 AP002414.1-201ENST00000391405 1147 ntBASIC13.2□□□□□ -0.3
TRBV12-3P01733 AL590627.1-203ENST00000421194 1026 ntBASIC13.2□□□□□ -0.3
TRBV12-3P01733 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV12-3P01733 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV12-3P01733 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV12-3P01733 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV12-3P01733 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV12-3P01733 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV12-3P01733 IL9RP2-201ENST00000423948 1312 ntBASIC13.19□□□□□ -0.3
TRBV12-3P01733 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV12-3P01733 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV12-3P01733 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 PCDHA12-202ENST00000613593 2588 ntBASIC13.19□□□□□ -0.3
TRBV12-3P01733 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV12-3P01733 RNA5SP415-201ENST00000517246 115 ntBASIC13.19□□□□□ -0.3
TRBV12-3P01733 IGHV3-22-201ENST00000520721 359 ntBASIC13.19□□□□□ -0.3
TRBV12-3P01733 SLC25A1P1-201ENST00000528351 927 ntBASIC13.19□□□□□ -0.3
TRBV12-3P01733 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV12-3P01733 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV12-3P01733 TERC-201ENST00000602385 541 ntBASIC13.19□□□□□ -0.3
TRBV12-3P01733 AC120114.3-201ENST00000611923 658 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms