Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.09■□□□□ 0.33
CBX6O95503 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX6O95503 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 AC024909.3-201ENST00000611513 2257 ntBASIC17.09■□□□□ 0.33
CBX6O95503 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 DDX43P3-201ENST00000441064 443 ntBASIC17.09■□□□□ 0.33
CBX6O95503 AC034232.1-201ENST00000506026 1064 ntBASIC17.09■□□□□ 0.33
CBX6O95503 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.09■□□□□ 0.33
CBX6O95503 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.09■□□□□ 0.33
CBX6O95503 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX6O95503 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX6O95503 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CBX6O95503 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CBX6O95503 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CBX6O95503 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX6O95503 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CBX6O95503 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX6O95503 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX6O95503 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.08■□□□□ 0.33
CBX6O95503 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.08■□□□□ 0.33
CBX6O95503 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX6O95503 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CBX6O95503 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX6O95503 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.08■□□□□ 0.33
CBX6O95503 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CBX6O95503 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CBX6O95503 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CBX6O95503 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
CBX6O95503 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CBX6O95503 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.08■□□□□ 0.32
CBX6O95503 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.08■□□□□ 0.32
CBX6O95503 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.08■□□□□ 0.32
CBX6O95503 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CBX6O95503 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.08■□□□□ 0.32
CBX6O95503 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CBX6O95503 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.08■□□□□ 0.32
CBX6O95503 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX6O95503 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.07■□□□□ 0.32
CBX6O95503 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.07■□□□□ 0.32
CBX6O95503 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX6O95503 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.07■□□□□ 0.32
CBX6O95503 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CBX6O95503 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CBX6O95503 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CBX6O95503 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.07■□□□□ 0.32
CBX6O95503 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CBX6O95503 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.07■□□□□ 0.32
CBX6O95503 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX6O95503 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CBX6O95503 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.07■□□□□ 0.32
CBX6O95503 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.07■□□□□ 0.32
CBX6O95503 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.07■□□□□ 0.32
CBX6O95503 NUS1P1-201ENST00000446295 882 ntBASIC17.07■□□□□ 0.32
CBX6O95503 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.07■□□□□ 0.32
CBX6O95503 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms