Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.3■□□□□ 0.04
CDRT1O95170 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 AC124947.2-201ENST00000547118 1133 ntBASIC15.3■□□□□ 0.04
CDRT1O95170 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.3■□□□□ 0.04
CDRT1O95170 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.3■□□□□ 0.04
CDRT1O95170 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.3■□□□□ 0.04
CDRT1O95170 FAM87A-204ENST00000613235 858 ntBASIC15.3■□□□□ 0.04
CDRT1O95170 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 DBET-201ENST00000630918 3363 ntBASIC15.3■□□□□ 0.04
CDRT1O95170 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDRT1O95170 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.29■□□□□ 0.04
CDRT1O95170 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDRT1O95170 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDRT1O95170 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDRT1O95170 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CDRT1O95170 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDRT1O95170 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 PVRIG2P-201ENST00000435460 978 ntBASIC15.29■□□□□ 0.04
CDRT1O95170 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.29■□□□□ 0.04
CDRT1O95170 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 AL512604.3-201ENST00000569583 964 ntBASIC15.29■□□□□ 0.04
CDRT1O95170 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.29■□□□□ 0.04
CDRT1O95170 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 TMEM191A-211ENST00000637163 1067 ntBASIC15.29■□□□□ 0.04
CDRT1O95170 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDRT1O95170 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDRT1O95170 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.29■□□□□ 0.04
CDRT1O95170 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDRT1O95170 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDRT1O95170 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.28■□□□□ 0.04
CDRT1O95170 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 MMP23A-201ENST00000234610 1017 ntBASIC15.28■□□□□ 0.04
CDRT1O95170 HMGA1P5-201ENST00000412453 271 ntBASIC15.28■□□□□ 0.04
CDRT1O95170 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.28■□□□□ 0.04
CDRT1O95170 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.28■□□□□ 0.04
CDRT1O95170 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDRT1O95170 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT1O95170 NEK4P2-201ENST00000580004 1012 ntBASIC15.28■□□□□ 0.04
CDRT1O95170 MIR4497-201ENST00000583208 89 ntBASIC15.28■□□□□ 0.04
CDRT1O95170 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT1O95170 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.28■□□□□ 0.04
CDRT1O95170 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.28■□□□□ 0.04
CDRT1O95170 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDRT1O95170 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CDRT1O95170 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT1O95170 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CDRT1O95170 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CDRT1O95170 NORAD-201ENST00000565493 5339 ntBASIC15.28■□□□□ 0.04
CDRT1O95170 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
CDRT1O95170 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDRT1O95170 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDRT1O95170 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT1O95170 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT1O95170 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT1O95170 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDRT1O95170 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.27■□□□□ 0.04
CDRT1O95170 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT1O95170 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms