Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.97■□□□□ 0.63
CLSTN1O94985 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 REXO1L11P-201ENST00000620964 1927 ntBASIC18.97■□□□□ 0.63
CLSTN1O94985 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.97■□□□□ 0.63
CLSTN1O94985 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CLSTN1O94985 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLSTN1O94985 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLSTN1O94985 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.96■□□□□ 0.63
CLSTN1O94985 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLSTN1O94985 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLSTN1O94985 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLSTN1O94985 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.96■□□□□ 0.63
CLSTN1O94985 COX5BP2-201ENST00000392354 334 ntBASIC18.96■□□□□ 0.63
CLSTN1O94985 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLSTN1O94985 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.96■□□□□ 0.63
CLSTN1O94985 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.96■□□□□ 0.63
CLSTN1O94985 NUS1P1-201ENST00000446295 882 ntBASIC18.96■□□□□ 0.63
CLSTN1O94985 KRT16P4-201ENST00000453883 522 ntBASIC18.96■□□□□ 0.63
CLSTN1O94985 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.96■□□□□ 0.63
CLSTN1O94985 KRT18P31-201ENST00000506277 1292 ntBASIC18.96■□□□□ 0.63
CLSTN1O94985 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.96■□□□□ 0.63
CLSTN1O94985 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.96■□□□□ 0.63
CLSTN1O94985 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.96■□□□□ 0.63
CLSTN1O94985 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.96■□□□□ 0.63
CLSTN1O94985 MIR5100-201ENST00000579544 119 ntBASIC18.96■□□□□ 0.63
CLSTN1O94985 AC011467.2-201ENST00000598425 242 ntBASIC18.96■□□□□ 0.63
CLSTN1O94985 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CLSTN1O94985 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.96■□□□□ 0.63
CLSTN1O94985 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.96■□□□□ 0.63
CLSTN1O94985 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLSTN1O94985 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
CLSTN1O94985 HLA-J-201ENST00000462773 1622 ntBASIC18.96■□□□□ 0.63
CLSTN1O94985 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.96■□□□□ 0.63
CLSTN1O94985 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLSTN1O94985 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.95■□□□□ 0.62
CLSTN1O94985 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 AL118508.1-201ENST00000613502 2345 ntBASIC18.95■□□□□ 0.62
CLSTN1O94985 NORAD-201ENST00000565493 5339 ntBASIC18.95■□□□□ 0.62
CLSTN1O94985 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.95■□□□□ 0.62
CLSTN1O94985 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.95■□□□□ 0.62
CLSTN1O94985 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.95■□□□□ 0.62
CLSTN1O94985 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CLSTN1O94985 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.95■□□□□ 0.62
CLSTN1O94985 IFNL4P1-201ENST00000607083 540 ntBASIC18.95■□□□□ 0.62
CLSTN1O94985 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.95■□□□□ 0.62
CLSTN1O94985 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.95■□□□□ 0.62
CLSTN1O94985 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLSTN1O94985 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLSTN1O94985 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLSTN1O94985 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLSTN1O94985 LINC00304-203ENST00000565008 1864 ntBASIC18.94■□□□□ 0.62
CLSTN1O94985 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms