Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PFDN1O60925 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.26■□□□□ 0.03
PFDN1O60925 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PFDN1O60925 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PFDN1O60925 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PFDN1O60925 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PFDN1O60925 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.25■□□□□ 0.03
PFDN1O60925 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.25■□□□□ 0.03
PFDN1O60925 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PFDN1O60925 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 KRT18P20-201ENST00000548986 1279 ntBASIC15.25■□□□□ 0.03
PFDN1O60925 TPRG1LP1-201ENST00000598702 760 ntBASIC15.25■□□□□ 0.03
PFDN1O60925 AP001160.3-201ENST00000601484 763 ntBASIC15.25■□□□□ 0.03
PFDN1O60925 AC092437.1-201ENST00000624794 1048 ntBASIC15.25■□□□□ 0.03
PFDN1O60925 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.25■□□□□ 0.03
PFDN1O60925 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.25■□□□□ 0.03
PFDN1O60925 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PFDN1O60925 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PFDN1O60925 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PFDN1O60925 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 REXO1L2P-201ENST00000425429 2069 ntBASIC15.24■□□□□ 0.03
PFDN1O60925 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PFDN1O60925 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.24■□□□□ 0.03
PFDN1O60925 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PFDN1O60925 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PFDN1O60925 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PFDN1O60925 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.24■□□□□ 0.03
PFDN1O60925 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PFDN1O60925 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PFDN1O60925 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.24■□□□□ 0.03
PFDN1O60925 MIR572-201ENST00000384983 95 ntBASIC15.24■□□□□ 0.03
PFDN1O60925 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.24■□□□□ 0.03
PFDN1O60925 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
PFDN1O60925 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PFDN1O60925 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PFDN1O60925 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.24■□□□□ 0.03
PFDN1O60925 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
PFDN1O60925 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PFDN1O60925 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.23■□□□□ 0.03
PFDN1O60925 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.23■□□□□ 0.03
PFDN1O60925 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.23■□□□□ 0.03
PFDN1O60925 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PFDN1O60925 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.23■□□□□ 0.03
PFDN1O60925 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.23■□□□□ 0.03
PFDN1O60925 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms