Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM6-TRIM34B2RNG4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 EMBP1-201ENST00000458200 901 ntBASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM6-TRIM34B2RNG4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 AL353135.1-201ENST00000606729 504 ntBASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM6-TRIM34B2RNG4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM6-TRIM34B2RNG4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TRIM6-TRIM34B2RNG4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.89■□□□□ 0.94
TRIM6-TRIM34B2RNG4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TRIM6-TRIM34B2RNG4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TRIM6-TRIM34B2RNG4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM6-TRIM34B2RNG4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 AL590787.1-201ENST00000568856 1315 ntBASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 AC021087.4-201ENST00000563761 564 ntBASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM6-TRIM34B2RNG4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms