Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 AC092068.3-201ENST00000587894 2016 ntBASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 AL136379.1-201ENST00000623471 2642 ntBASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 IER3-202ENST00000376377 1350 ntBASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 DDX43P3-201ENST00000441064 443 ntBASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 LINC00304-203ENST00000565008 1864 ntBASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 LYSMD4-203ENST00000378904 2122 ntBASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HHLA3Q9XRX5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HHLA3Q9XRX5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms