Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 AC006449.5-201ENST00000610658 2098 ntBASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 KRT18P57-201ENST00000443599 1254 ntBASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 AC023824.1-201ENST00000562945 2975 ntBASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 AL662844.4-201ENST00000606367 2838 ntBASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB4Q9UN71 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGB4Q9UN71 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGB4Q9UN71 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.64■□□□□ 0.26
PCDHGB4Q9UN71 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.64■□□□□ 0.26
PCDHGB4Q9UN71 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGB4Q9UN71 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 AC096633.1-201ENST00000422446 749 ntBASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 KRT18P38-201ENST00000449496 1282 ntBASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 AC097374.2-201ENST00000618617 1306 ntBASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB4Q9UN71 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 Z83836.1-201ENST00000624605 1642 ntBASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB4Q9UN71 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms