Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 MIR346-201ENST00000362234 95 ntBASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 MIR943-201ENST00000401286 94 ntBASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 BASP1P1-201ENST00000430708 665 ntBASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 AC138761.1-201ENST00000584393 385 ntBASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 AC131009.4-201ENST00000624048 1740 ntBASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC10Q9NYD6 AL021920.2-201ENST00000624828 1351 ntBASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 AC107890.1-201ENST00000422478 521 ntBASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 MPDU1-223ENST00000582151 728 ntBASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 AC008677.1-201ENST00000519230 1561 ntBASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC10Q9NYD6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 AC140878.1-201ENST00000565277 250 ntBASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC10Q9NYD6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms