Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 AC078925.2-201ENST00000624013 1973 ntBASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
THUMPD1Q9NXG2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 DRAXINP1-201ENST00000437611 948 ntBASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 AC005332.1-201ENST00000577698 1310 ntBASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 AC016734.2-201ENST00000624325 1377 ntBASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD1Q9NXG2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 TP73-AS1-210ENST00000637775 1455 ntBASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 AC092171.3-201ENST00000610122 2651 ntBASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 AC073592.5-201ENST00000624854 528 ntBASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 AC079328.2-201ENST00000561241 3354 ntBASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 AC233702.3-201ENST00000578656 1387 ntBASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms