Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SDHAF3Q9NRP4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 AL590787.1-201ENST00000568856 1315 ntBASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 AC009078.2-202ENST00000463353 338 ntBASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 GGTLC5P-201ENST00000617623 998 ntBASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SDHAF3Q9NRP4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 AC141586.5-201ENST00000624546 2050 ntBASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 FDX1P1-201ENST00000449115 551 ntBASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 AL356488.2-201ENST00000602755 427 ntBASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 AF228730.7-201ENST00000641842 219 ntBASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.71■□□□□ 0.11
SDHAF3Q9NRP4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.71■□□□□ 0.1
SDHAF3Q9NRP4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SDHAF3Q9NRP4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SDHAF3Q9NRP4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
SDHAF3Q9NRP4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SDHAF3Q9NRP4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SDHAF3Q9NRP4 HLA-A-201ENST00000376802 1334 ntBASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SDHAF3Q9NRP4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms