Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 PCED1CP-201ENST00000419887 785 ntBASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 BX276092.5-203ENST00000456199 560 ntBASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 KRT18P35-201ENST00000510488 1269 ntBASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 AL121672.3-201ENST00000608644 468 ntBASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 AL592071.1-201ENST00000611956 408 ntBASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 LINC02199-201ENST00000506655 2702 ntBASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTN4IP1Q8WWV3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 RN7SL606P-201ENST00000472779 293 ntBASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 AC010331.1-201ENST00000611423 582 ntBASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 IGHV3-41-201ENST00000613121 348 ntBASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 AC124864.1-201ENST00000623408 392 ntBASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 IER3-202ENST00000376377 1350 ntBASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTN4IP1Q8WWV3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 AC078925.2-201ENST00000624013 1973 ntBASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 MIR1224-201ENST00000408193 85 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms