Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
STAG1Q8WVM7 AL021920.2-201ENST00000624828 1351 ntBASIC20.08■□□□□ 0.8
STAG1Q8WVM7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
STAG1Q8WVM7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
STAG1Q8WVM7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 TUBB8P12-201ENST00000308911 1335 ntBASIC20.06■□□□□ 0.8
STAG1Q8WVM7 TUBB7P-202ENST00000428444 1305 ntBASIC20.06■□□□□ 0.8
STAG1Q8WVM7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 TUBB8P7-204ENST00000567960 1332 ntBASIC20.06■□□□□ 0.8
STAG1Q8WVM7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 YBX2P1-201ENST00000394192 760 ntBASIC20.06■□□□□ 0.8
STAG1Q8WVM7 MIR1233-2-201ENST00000408138 82 ntBASIC20.06■□□□□ 0.8
STAG1Q8WVM7 MIR1233-1-201ENST00000408722 82 ntBASIC20.06■□□□□ 0.8
STAG1Q8WVM7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
STAG1Q8WVM7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 AC023274.1-201ENST00000418278 595 ntBASIC20.05■□□□□ 0.8
STAG1Q8WVM7 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.05■□□□□ 0.8
STAG1Q8WVM7 AC004832.2-201ENST00000426397 482 ntBASIC20.05■□□□□ 0.8
STAG1Q8WVM7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 AC018845.2-201ENST00000568326 409 ntBASIC20.05■□□□□ 0.8
STAG1Q8WVM7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
STAG1Q8WVM7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
STAG1Q8WVM7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms