Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CARMIL3Q8ND23 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.28■■□□□ 1
CARMIL3Q8ND23 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CARMIL3Q8ND23 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CARMIL3Q8ND23 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.28■■□□□ 1
CARMIL3Q8ND23 HCG4-201ENST00000418983 998 ntBASIC21.28■■□□□ 1
CARMIL3Q8ND23 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CARMIL3Q8ND23 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.28■■□□□ 1
CARMIL3Q8ND23 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.28■■□□□ 1
CARMIL3Q8ND23 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.28■■□□□ 1
CARMIL3Q8ND23 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.28■■□□□ 1
CARMIL3Q8ND23 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.28■■□□□ 1
CARMIL3Q8ND23 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CARMIL3Q8ND23 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 MRPS18AP1-201ENST00000414458 589 ntBASIC21.27■■□□□ 1
CARMIL3Q8ND23 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.27■■□□□ 1
CARMIL3Q8ND23 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CARMIL3Q8ND23 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CARMIL3Q8ND23 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CARMIL3Q8ND23 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CARMIL3Q8ND23 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.27■□□□□ 0.99
CARMIL3Q8ND23 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 RNU1-129P-201ENST00000384064 167 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 AC097493.3-201ENST00000509725 367 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 ALG1L8P-201ENST00000533887 760 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 AP000842.3-202ENST00000569238 1080 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 MIR3909-201ENST00000579518 119 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 U1.21-201ENST00000580816 167 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 AL031055.1-201ENST00000606362 631 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 AC008267.7-201ENST00000624570 1194 ntBASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARMIL3Q8ND23 AC005332.8-201ENST00000622750 2735 ntBASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 SERBP1P5-201ENST00000510079 1181 ntBASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CARMIL3Q8ND23 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CARMIL3Q8ND23 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CARMIL3Q8ND23 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CARMIL3Q8ND23 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CARMIL3Q8ND23 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CARMIL3Q8ND23 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.24■□□□□ 0.99
CARMIL3Q8ND23 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms