Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD2Q8IV50 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
LYSMD2Q8IV50 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.05■□□□□ -0
LYSMD2Q8IV50 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD2Q8IV50 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LYSMD2Q8IV50 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LYSMD2Q8IV50 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD2Q8IV50 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.05■□□□□ -0
LYSMD2Q8IV50 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD2Q8IV50 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.05■□□□□ -0
LYSMD2Q8IV50 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD2Q8IV50 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD2Q8IV50 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LYSMD2Q8IV50 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 ESRRAP1-201ENST00000400596 1257 ntBASIC15.04■□□□□ -0
LYSMD2Q8IV50 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD2Q8IV50 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LYSMD2Q8IV50 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 AC023908.3-201ENST00000564211 3047 ntBASIC15.03■□□□□ -0
LYSMD2Q8IV50 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 AC073648.6-201ENST00000641589 218 ntBASIC15.03■□□□□ -0
LYSMD2Q8IV50 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 ME2P1-201ENST00000426028 1970 ntBASIC15.03■□□□□ -0
LYSMD2Q8IV50 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms