Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 TMPOP1-202ENST00000424642 1267 ntBASIC17.27■□□□□ 0.36
PACS2Q86VP3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 AC010326.4-201ENST00000604665 891 ntBASIC17.27■□□□□ 0.36
PACS2Q86VP3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PACS2Q86VP3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PACS2Q86VP3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PACS2Q86VP3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PACS2Q86VP3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PACS2Q86VP3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PACS2Q86VP3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PACS2Q86VP3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PACS2Q86VP3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PACS2Q86VP3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
PACS2Q86VP3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.26■□□□□ 0.35
PACS2Q86VP3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 KRT8P3-201ENST00000519669 1449 ntBASIC17.26■□□□□ 0.35
PACS2Q86VP3 OR6D1P-203ENST00000641209 4860 ntBASIC17.26■□□□□ 0.35
PACS2Q86VP3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.26■□□□□ 0.35
PACS2Q86VP3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PACS2Q86VP3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PACS2Q86VP3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 AL845331.1-201ENST00000424978 1190 ntBASIC17.25■□□□□ 0.35
PACS2Q86VP3 KRT18P57-201ENST00000443599 1254 ntBASIC17.25■□□□□ 0.35
PACS2Q86VP3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 AC010203.1-204ENST00000548782 407 ntBASIC17.25■□□□□ 0.35
PACS2Q86VP3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 RN7SL850P-201ENST00000579959 291 ntBASIC17.25■□□□□ 0.35
PACS2Q86VP3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms