Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 AC016734.2-201ENST00000624325 1377 ntBASIC15.84■□□□□ 0.13
TUBA1AQ71U36 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 AC105917.1-201ENST00000506637 2539 ntBASIC15.84■□□□□ 0.13
TUBA1AQ71U36 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TUBA1AQ71U36 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
TUBA1AQ71U36 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TUBA1AQ71U36 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
TUBA1AQ71U36 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
TUBA1AQ71U36 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TUBA1AQ71U36 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TUBA1AQ71U36 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TUBA1AQ71U36 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TUBA1AQ71U36 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 TSSC2-201ENST00000450217 709 ntBASIC15.83■□□□□ 0.12
TUBA1AQ71U36 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 KRT8P26-201ENST00000534154 1276 ntBASIC15.83■□□□□ 0.12
TUBA1AQ71U36 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 AL121672.3-201ENST00000608644 468 ntBASIC15.83■□□□□ 0.12
TUBA1AQ71U36 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 KRT89P-201ENST00000620027 1478 ntBASIC15.83■□□□□ 0.12
TUBA1AQ71U36 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TUBA1AQ71U36 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 AC092119.3-201ENST00000612618 583 ntBASIC15.82■□□□□ 0.12
TUBA1AQ71U36 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms