Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 AC002558.1-201ENST00000488906 803 ntBASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCHD4Q6ZW05 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 AC104076.2-201ENST00000448912 469 ntBASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 CYP2T1P-202ENST00000641596 2535 ntBASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 Z83836.1-201ENST00000624605 1642 ntBASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 AL662844.4-201ENST00000606367 2838 ntBASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCHD4Q6ZW05 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms