Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15□□□□□ -0.01
C11orf88Q6PI97 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15□□□□□ -0.01
C11orf88Q6PI97 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15□□□□□ -0.01
C11orf88Q6PI97 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15□□□□□ -0.01
C11orf88Q6PI97 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15□□□□□ -0.01
C11orf88Q6PI97 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15□□□□□ -0.01
C11orf88Q6PI97 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15□□□□□ -0.01
C11orf88Q6PI97 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15□□□□□ -0.01
C11orf88Q6PI97 AL163051.1-201ENST00000569214 1512 ntBASIC15□□□□□ -0.01
C11orf88Q6PI97 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
C11orf88Q6PI97 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15□□□□□ -0.01
C11orf88Q6PI97 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15□□□□□ -0.01
C11orf88Q6PI97 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15□□□□□ -0.01
C11orf88Q6PI97 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15□□□□□ -0.01
C11orf88Q6PI97 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15□□□□□ -0.01
C11orf88Q6PI97 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
C11orf88Q6PI97 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
C11orf88Q6PI97 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.99□□□□□ -0.01
C11orf88Q6PI97 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AP000550.4-202ENST00000639755 178 ntBASIC14.99□□□□□ -0.01
C11orf88Q6PI97 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.99□□□□□ -0.01
C11orf88Q6PI97 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
C11orf88Q6PI97 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms