Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 AC124067.4-201ENST00000519691 2379 ntBASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 AKR1C7P-201ENST00000305623 895 ntBASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 FGFR3P6-201ENST00000457012 610 ntBASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 AL353135.1-201ENST00000606729 504 ntBASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 AL355877.3-201ENST00000622820 899 ntBASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 AL356309.3-201ENST00000624132 1934 ntBASIC16.98■□□□□ 0.31
ZNF549Q6P9A3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 AL590787.1-201ENST00000568856 1315 ntBASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 SART3-203ENST00000546611 1184 ntBASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 AC091304.2-201ENST00000564639 760 ntBASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 PRELID1P1-202ENST00000567272 903 ntBASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 AL022326.1-202ENST00000641533 845 ntBASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF549Q6P9A3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF549Q6P9A3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms