Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL121772.3-201ENST00000610840 674 ntBASIC15.61■□□□□ 0.09
NIPAL3Q6P499 AC078925.2-201ENST00000624013 1973 ntBASIC15.61■□□□□ 0.09
NIPAL3Q6P499 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 RNF216P1-203ENST00000404404 2427 ntBASIC15.6■□□□□ 0.09
NIPAL3Q6P499 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 KRT8P10-201ENST00000450021 1447 ntBASIC15.6■□□□□ 0.09
NIPAL3Q6P499 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NIPAL3Q6P499 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 DOC2GP-204ENST00000639052 2548 ntBASIC15.59■□□□□ 0.09
NIPAL3Q6P499 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 AC124947.2-201ENST00000547118 1133 ntBASIC15.59■□□□□ 0.09
NIPAL3Q6P499 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 AC091304.2-201ENST00000564639 760 ntBASIC15.59■□□□□ 0.09
NIPAL3Q6P499 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.59■□□□□ 0.09
NIPAL3Q6P499 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NIPAL3Q6P499 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NIPAL3Q6P499 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.58■□□□□ 0.09
NIPAL3Q6P499 AL049757.1-201ENST00000616842 1596 ntBASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms