Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.96■□□□□ 0.15
RFX4Q33E94 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX4Q33E94 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX4Q33E94 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
RFX4Q33E94 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFX4Q33E94 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RFX4Q33E94 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.96■□□□□ 0.14
RFX4Q33E94 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.96■□□□□ 0.14
RFX4Q33E94 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.96■□□□□ 0.14
RFX4Q33E94 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFX4Q33E94 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.95■□□□□ 0.14
RFX4Q33E94 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RFX4Q33E94 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.95■□□□□ 0.14
RFX4Q33E94 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 AL513477.1-201ENST00000602865 2407 ntBASIC15.95■□□□□ 0.14
RFX4Q33E94 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.95■□□□□ 0.14
RFX4Q33E94 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RFX4Q33E94 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
RFX4Q33E94 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RFX4Q33E94 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 SPDYE15P-201ENST00000424157 909 ntBASIC15.95■□□□□ 0.14
RFX4Q33E94 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.95■□□□□ 0.14
RFX4Q33E94 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.95■□□□□ 0.14
RFX4Q33E94 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RFX4Q33E94 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RFX4Q33E94 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RFX4Q33E94 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX4Q33E94 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.94■□□□□ 0.14
RFX4Q33E94 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.94■□□□□ 0.14
RFX4Q33E94 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RFX4Q33E94 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 IGHGP-201ENST00000390555 1178 ntBASIC15.94■□□□□ 0.14
RFX4Q33E94 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
RFX4Q33E94 AC011558.1-201ENST00000623459 338 ntBASIC15.94■□□□□ 0.14
RFX4Q33E94 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.94■□□□□ 0.14
RFX4Q33E94 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RFX4Q33E94 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RFX4Q33E94 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.94■□□□□ 0.14
RFX4Q33E94 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.94■□□□□ 0.14
RFX4Q33E94 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.94■□□□□ 0.14
RFX4Q33E94 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.94■□□□□ 0.14
RFX4Q33E94 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RFX4Q33E94 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
RFX4Q33E94 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX4Q33E94 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFX4Q33E94 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX4Q33E94 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFX4Q33E94 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.93■□□□□ 0.14
RFX4Q33E94 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RFX4Q33E94 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX4Q33E94 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFX4Q33E94 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFX4Q33E94 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX4Q33E94 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX4Q33E94 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RFX4Q33E94 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RFX4Q33E94 EGFEM1P-202ENST00000431685 1563 ntBASIC15.93■□□□□ 0.14
RFX4Q33E94 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms