Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 RPS2P28-201ENST00000314255 741 ntBASIC19.44■□□□□ 0.7
NCBP1Q09161 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.44■□□□□ 0.7
NCBP1Q09161 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 AC093909.1-201ENST00000504731 1122 ntBASIC19.44■□□□□ 0.7
NCBP1Q09161 AC079776.4-201ENST00000511039 504 ntBASIC19.44■□□□□ 0.7
NCBP1Q09161 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.44■□□□□ 0.7
NCBP1Q09161 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.44■□□□□ 0.7
NCBP1Q09161 AP001269.4-201ENST00000609611 512 ntBASIC19.44■□□□□ 0.7
NCBP1Q09161 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.44■□□□□ 0.7
NCBP1Q09161 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.44■□□□□ 0.7
NCBP1Q09161 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NCBP1Q09161 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 KRT8P47-201ENST00000604727 1398 ntBASIC19.44■□□□□ 0.7
NCBP1Q09161 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.44■□□□□ 0.7
NCBP1Q09161 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCBP1Q09161 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
NCBP1Q09161 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
NCBP1Q09161 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
NCBP1Q09161 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.43■□□□□ 0.7
NCBP1Q09161 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.43■□□□□ 0.7
NCBP1Q09161 COX5BP2-201ENST00000392354 334 ntBASIC19.43■□□□□ 0.7
NCBP1Q09161 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.43■□□□□ 0.7
NCBP1Q09161 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.43■□□□□ 0.7
NCBP1Q09161 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.43■□□□□ 0.7
NCBP1Q09161 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
NCBP1Q09161 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.43■□□□□ 0.7
NCBP1Q09161 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.43■□□□□ 0.7
NCBP1Q09161 AL773604.1-201ENST00000617417 272 ntBASIC19.43■□□□□ 0.7
NCBP1Q09161 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.43■□□□□ 0.7
NCBP1Q09161 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NCBP1Q09161 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NCBP1Q09161 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.43■□□□□ 0.7
NCBP1Q09161 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.43■□□□□ 0.7
NCBP1Q09161 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCBP1Q09161 AL355312.1-201ENST00000407115 2176 ntBASIC19.43■□□□□ 0.7
NCBP1Q09161 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.43■□□□□ 0.7
NCBP1Q09161 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.42■□□□□ 0.7
NCBP1Q09161 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.42■□□□□ 0.7
NCBP1Q09161 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 KRT18P67-201ENST00000432816 1264 ntBASIC19.42■□□□□ 0.7
NCBP1Q09161 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.42■□□□□ 0.7
NCBP1Q09161 FGFR3P6-201ENST00000457012 610 ntBASIC19.42■□□□□ 0.7
NCBP1Q09161 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.42■□□□□ 0.7
NCBP1Q09161 SLC25A6P4-201ENST00000586535 553 ntBASIC19.42■□□□□ 0.7
NCBP1Q09161 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.42■□□□□ 0.7
NCBP1Q09161 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NCBP1Q09161 PCDHB17P-201ENST00000539533 2393 ntBASIC19.42■□□□□ 0.7
NCBP1Q09161 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NCBP1Q09161 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NCBP1Q09161 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCBP1Q09161 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms