Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.84□□□□□ -0.03
UBA52P62987 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.84□□□□□ -0.03
UBA52P62987 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.84□□□□□ -0.03
UBA52P62987 AC074051.2-201ENST00000565115 352 ntBASIC14.84□□□□□ -0.03
UBA52P62987 AC138894.3-201ENST00000603787 634 ntBASIC14.84□□□□□ -0.03
UBA52P62987 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 IGHV3-41-201ENST00000613121 348 ntBASIC14.84□□□□□ -0.03
UBA52P62987 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.84□□□□□ -0.03
UBA52P62987 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.84□□□□□ -0.03
UBA52P62987 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 MYLKP1-201ENST00000509077 1580 ntBASIC14.84□□□□□ -0.03
UBA52P62987 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.84□□□□□ -0.03
UBA52P62987 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.84□□□□□ -0.03
UBA52P62987 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
UBA52P62987 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
UBA52P62987 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBA52P62987 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBA52P62987 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBA52P62987 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBA52P62987 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBA52P62987 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBA52P62987 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
UBA52P62987 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 AC005052.1-201ENST00000625181 2492 ntBASIC14.83□□□□□ -0.04
UBA52P62987 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 GMCL1P1-201ENST00000463439 1581 ntBASIC14.83□□□□□ -0.04
UBA52P62987 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UBA52P62987 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.83□□□□□ -0.04
UBA52P62987 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.83□□□□□ -0.04
UBA52P62987 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.83□□□□□ -0.04
UBA52P62987 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.83□□□□□ -0.04
UBA52P62987 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UBA52P62987 AL390719.2-201ENST00000606993 987 ntBASIC14.83□□□□□ -0.04
UBA52P62987 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
UBA52P62987 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UBA52P62987 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.83□□□□□ -0.04
UBA52P62987 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
UBA52P62987 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.83□□□□□ -0.04
UBA52P62987 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UBA52P62987 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
UBA52P62987 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.83□□□□□ -0.04
UBA52P62987 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBA52P62987 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms