Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HERVK_113P62684 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HERVK_113P62684 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HERVK_113P62684 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HERVK_113P62684 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
HERVK_113P62684 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
HERVK_113P62684 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.76■□□□□ 0.75
HERVK_113P62684 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
HERVK_113P62684 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HERVK_113P62684 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
HERVK_113P62684 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.76■□□□□ 0.75
HERVK_113P62684 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.76■□□□□ 0.75
HERVK_113P62684 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.76■□□□□ 0.75
HERVK_113P62684 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.76■□□□□ 0.75
HERVK_113P62684 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.76■□□□□ 0.75
HERVK_113P62684 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 SPDYE11-202ENST00000450699 704 ntBASIC19.76■□□□□ 0.75
HERVK_113P62684 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.76■□□□□ 0.75
HERVK_113P62684 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.76■□□□□ 0.75
HERVK_113P62684 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 SPDYE9P-201ENST00000570642 692 ntBASIC19.76■□□□□ 0.75
HERVK_113P62684 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.76■□□□□ 0.75
HERVK_113P62684 SPDYE10P-202ENST00000612005 668 ntBASIC19.76■□□□□ 0.75
HERVK_113P62684 SPDYE8P-202ENST00000612377 668 ntBASIC19.76■□□□□ 0.75
HERVK_113P62684 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HERVK_113P62684 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.76■□□□□ 0.75
HERVK_113P62684 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.76■□□□□ 0.75
HERVK_113P62684 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERVK_113P62684 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.76■□□□□ 0.75
HERVK_113P62684 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.75■□□□□ 0.75
HERVK_113P62684 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.75■□□□□ 0.75
HERVK_113P62684 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.75■□□□□ 0.75
HERVK_113P62684 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.75■□□□□ 0.75
HERVK_113P62684 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.75■□□□□ 0.75
HERVK_113P62684 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.75■□□□□ 0.75
HERVK_113P62684 AC005237.2-201ENST00000434368 219 ntBASIC19.75■□□□□ 0.75
HERVK_113P62684 COX20P2-201ENST00000452636 358 ntBASIC19.75■□□□□ 0.75
HERVK_113P62684 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.75■□□□□ 0.75
HERVK_113P62684 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 Z92544.3-201ENST00000624747 417 ntBASIC19.75■□□□□ 0.75
HERVK_113P62684 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERVK_113P62684 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.75■□□□□ 0.75
HERVK_113P62684 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.74■□□□□ 0.75
HERVK_113P62684 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.74■□□□□ 0.75
HERVK_113P62684 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.74■□□□□ 0.75
HERVK_113P62684 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.74■□□□□ 0.75
HERVK_113P62684 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.74■□□□□ 0.75
HERVK_113P62684 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HERVK_113P62684 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HERVK_113P62684 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.74■□□□□ 0.75
HERVK_113P62684 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HERVK_113P62684 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
HERVK_113P62684 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.74■□□□□ 0.75
HERVK_113P62684 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.74■□□□□ 0.75
HERVK_113P62684 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.74■□□□□ 0.75
HERVK_113P62684 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.74■□□□□ 0.75
HERVK_113P62684 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.74■□□□□ 0.75
HERVK_113P62684 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.74■□□□□ 0.75
HERVK_113P62684 AL390955.2-201ENST00000603032 514 ntBASIC19.74■□□□□ 0.75
HERVK_113P62684 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERVK_113P62684 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms