Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN20P56880 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CLDN20P56880 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN20P56880 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN20P56880 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN20P56880 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 AL020989.1-201ENST00000422979 469 ntBASIC15.73■□□□□ 0.11
CLDN20P56880 AC018712.1-201ENST00000455767 687 ntBASIC15.73■□□□□ 0.11
CLDN20P56880 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN20P56880 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN20P56880 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN20P56880 MTDHP4-201ENST00000600287 670 ntBASIC15.73■□□□□ 0.11
CLDN20P56880 AC025062.2-201ENST00000605477 670 ntBASIC15.73■□□□□ 0.11
CLDN20P56880 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN20P56880 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN20P56880 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CLDN20P56880 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CLDN20P56880 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN20P56880 FLJ38576-201ENST00000623820 2459 ntBASIC15.73■□□□□ 0.11
CLDN20P56880 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN20P56880 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN20P56880 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN20P56880 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLDN20P56880 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN20P56880 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN20P56880 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLDN20P56880 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 MYCLP1-201ENST00000372451 1075 ntBASIC15.72■□□□□ 0.11
CLDN20P56880 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN20P56880 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN20P56880 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLDN20P56880 HNRNPDP1-201ENST00000439535 754 ntBASIC15.72■□□□□ 0.11
CLDN20P56880 STK19B-204ENST00000512515 211 ntBASIC15.72■□□□□ 0.11
CLDN20P56880 AL662844.1-201ENST00000546340 181 ntBASIC15.72■□□□□ 0.11
CLDN20P56880 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.72■□□□□ 0.11
CLDN20P56880 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN20P56880 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN20P56880 AC064862.7-201ENST00000604520 867 ntBASIC15.72■□□□□ 0.11
CLDN20P56880 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 AL773604.1-201ENST00000617417 272 ntBASIC15.72■□□□□ 0.11
CLDN20P56880 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN20P56880 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN20P56880 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN20P56880 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN20P56880 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN20P56880 HLA-J-201ENST00000462773 1622 ntBASIC15.72■□□□□ 0.11
CLDN20P56880 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN20P56880 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN20P56880 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLDN20P56880 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN20P56880 HLA-A-201ENST00000376802 1334 ntBASIC15.71■□□□□ 0.11
CLDN20P56880 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN20P56880 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 AC009336.1-201ENST00000608941 1553 ntBASIC15.71■□□□□ 0.11
CLDN20P56880 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CLDN20P56880 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN20P56880 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN20P56880 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms