Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC141257.4-201ENST00000634557 245 ntBASIC14.93□□□□□ -0.02
CLDN12P56749 AC136944.6-201ENST00000634818 245 ntBASIC14.93□□□□□ -0.02
CLDN12P56749 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN12P56749 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN12P56749 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CLDN12P56749 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDN12P56749 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN12P56749 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CLDN12P56749 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN12P56749 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.92□□□□□ -0.02
CLDN12P56749 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN12P56749 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN12P56749 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN12P56749 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN12P56749 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN12P56749 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN12P56749 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN12P56749 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN12P56749 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN12P56749 AL353692.3-201ENST00000407031 1396 ntBASIC14.92□□□□□ -0.02
CLDN12P56749 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN12P56749 EGFEM1P-202ENST00000431685 1563 ntBASIC14.92□□□□□ -0.02
CLDN12P56749 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN12P56749 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN12P56749 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLDN12P56749 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN12P56749 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 KRT17P2-201ENST00000300992 1314 ntBASIC14.92□□□□□ -0.02
CLDN12P56749 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN12P56749 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLDN12P56749 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLDN12P56749 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 IGHGP-201ENST00000390555 1178 ntBASIC14.91□□□□□ -0.02
CLDN12P56749 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 IGHV3-52-201ENST00000519770 353 ntBASIC14.91□□□□□ -0.02
CLDN12P56749 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDN12P56749 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN12P56749 AC019129.2-201ENST00000609837 1235 ntBASIC14.91□□□□□ -0.02
CLDN12P56749 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN12P56749 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN12P56749 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 ALOX12P2-203ENST00000570921 1945 ntBASIC14.91□□□□□ -0.02
CLDN12P56749 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms