Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.27■□□□□ 0.36
LIMK2P53671 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.27■□□□□ 0.36
LIMK2P53671 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.27■□□□□ 0.36
LIMK2P53671 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.27■□□□□ 0.36
LIMK2P53671 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIMK2P53671 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.27■□□□□ 0.36
LIMK2P53671 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.27■□□□□ 0.36
LIMK2P53671 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
LIMK2P53671 AL031284.1-201ENST00000419297 478 ntBASIC17.27■□□□□ 0.36
LIMK2P53671 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.27■□□□□ 0.36
LIMK2P53671 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.27■□□□□ 0.36
LIMK2P53671 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.27■□□□□ 0.36
LIMK2P53671 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.27■□□□□ 0.36
LIMK2P53671 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LIMK2P53671 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.27■□□□□ 0.36
LIMK2P53671 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LIMK2P53671 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
LIMK2P53671 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIMK2P53671 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.27■□□□□ 0.35
LIMK2P53671 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.27■□□□□ 0.35
LIMK2P53671 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LIMK2P53671 UBALD1-205ENST00000590891 2641 ntBASIC17.27■□□□□ 0.35
LIMK2P53671 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.27■□□□□ 0.35
LIMK2P53671 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
LIMK2P53671 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.27■□□□□ 0.35
LIMK2P53671 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIMK2P53671 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIMK2P53671 AC078925.2-201ENST00000624013 1973 ntBASIC17.26■□□□□ 0.35
LIMK2P53671 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LIMK2P53671 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LIMK2P53671 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIMK2P53671 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIMK2P53671 RNF216P1-203ENST00000404404 2427 ntBASIC17.26■□□□□ 0.35
LIMK2P53671 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIMK2P53671 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.26■□□□□ 0.35
LIMK2P53671 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIMK2P53671 FGFR3P6-201ENST00000457012 610 ntBASIC17.26■□□□□ 0.35
LIMK2P53671 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.26■□□□□ 0.35
LIMK2P53671 MTDHP3-201ENST00000594186 672 ntBASIC17.26■□□□□ 0.35
LIMK2P53671 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.26■□□□□ 0.35
LIMK2P53671 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIMK2P53671 AC009336.1-201ENST00000608941 1553 ntBASIC17.26■□□□□ 0.35
LIMK2P53671 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LIMK2P53671 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LIMK2P53671 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LIMK2P53671 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LIMK2P53671 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LIMK2P53671 AL135999.2-201ENST00000622438 1686 ntBASIC17.26■□□□□ 0.35
LIMK2P53671 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
LIMK2P53671 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 IL9RP2-201ENST00000423948 1312 ntBASIC17.25■□□□□ 0.35
LIMK2P53671 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.25■□□□□ 0.35
LIMK2P53671 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.25■□□□□ 0.35
LIMK2P53671 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.25■□□□□ 0.35
LIMK2P53671 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.25■□□□□ 0.35
LIMK2P53671 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LIMK2P53671 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.25■□□□□ 0.35
LIMK2P53671 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LIMK2P53671 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.25■□□□□ 0.35
LIMK2P53671 AC018712.1-201ENST00000455767 687 ntBASIC17.25■□□□□ 0.35
LIMK2P53671 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.25■□□□□ 0.35
LIMK2P53671 AC093909.1-201ENST00000504731 1122 ntBASIC17.25■□□□□ 0.35
LIMK2P53671 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.25■□□□□ 0.35
LIMK2P53671 AP001269.4-201ENST00000609611 512 ntBASIC17.25■□□□□ 0.35
LIMK2P53671 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.25■□□□□ 0.35
LIMK2P53671 AC148477.8-201ENST00000624298 468 ntBASIC17.25■□□□□ 0.35
LIMK2P53671 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 PCDHB19P-201ENST00000570871 2371 ntBASIC17.25■□□□□ 0.35
LIMK2P53671 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.25■□□□□ 0.35
LIMK2P53671 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms