Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 AD000864.1-201ENST00000624076 2295 ntBASIC10.9□□□□□ -0.66
UBE2AP49459 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2AP49459 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
UBE2AP49459 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2AP49459 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2AP49459 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2AP49459 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2AP49459 RNF126P1-202ENST00000569893 925 ntBASIC10.9□□□□□ -0.66
UBE2AP49459 AC090616.6-201ENST00000582640 721 ntBASIC10.9□□□□□ -0.66
UBE2AP49459 RBM42-202ENST00000586618 771 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2AP49459 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2AP49459 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC10.9□□□□□ -0.66
UBE2AP49459 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2AP49459 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2AP49459 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2AP49459 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC10.9□□□□□ -0.67
UBE2AP49459 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC10.9□□□□□ -0.67
UBE2AP49459 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
UBE2AP49459 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
UBE2AP49459 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
UBE2AP49459 BANP-227ENST00000626016 2144 ntTSL 2 BASIC10.9□□□□□ -0.67
UBE2AP49459 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
UBE2AP49459 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
UBE2AP49459 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
UBE2AP49459 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
UBE2AP49459 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 MYO15B-237ENST00000642007 4893 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2AP49459 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2AP49459 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 MYCLP1-201ENST00000372451 1075 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 RCN1P1-201ENST00000400413 996 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 BX276092.5-203ENST00000456199 560 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 CNP-204ENST00000472031 1019 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC10.89□□□□□ -0.67
UBE2AP49459 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC10.89□□□□□ -0.67
UBE2AP49459 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 CD320-202ENST00000537716 1119 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2AP49459 AC111152.3-201ENST00000569699 673 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.89□□□□□ -0.67
UBE2AP49459 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.89□□□□□ -0.67
UBE2AP49459 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 TMED1-207ENST00000591695 809 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2AP49459 AC011498.5-201ENST00000592027 486 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 AC083849.1-201ENST00000615227 514 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC10.89□□□□□ -0.67
UBE2AP49459 HYMAI.1-201ENST00000620949 238 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 WDR6-223ENST00000627177 207 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2AP49459 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
UBE2AP49459 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 CROCCP2-202ENST00000412962 2773 ntBASIC10.89□□□□□ -0.67
UBE2AP49459 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
UBE2AP49459 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms