Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PDE6BP35913 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PDE6BP35913 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.89■□□□□ 0.93
PDE6BP35913 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.89■□□□□ 0.93
PDE6BP35913 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.89■□□□□ 0.93
PDE6BP35913 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 AL138781.2-201ENST00000617896 1843 ntBASIC20.89■□□□□ 0.93
PDE6BP35913 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.89■□□□□ 0.93
PDE6BP35913 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
PDE6BP35913 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6BP35913 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE6BP35913 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PDE6BP35913 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PDE6BP35913 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE6BP35913 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.88■□□□□ 0.93
PDE6BP35913 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.88■□□□□ 0.93
PDE6BP35913 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE6BP35913 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDE6BP35913 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE6BP35913 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.88■□□□□ 0.93
PDE6BP35913 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6BP35913 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PDE6BP35913 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PDE6BP35913 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDE6BP35913 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PDE6BP35913 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PDE6BP35913 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDE6BP35913 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE6BP35913 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.87■□□□□ 0.93
PDE6BP35913 ATP5G2P4-201ENST00000442175 420 ntBASIC20.87■□□□□ 0.93
PDE6BP35913 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE6BP35913 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.87■□□□□ 0.93
PDE6BP35913 AC073389.1-201ENST00000595595 795 ntBASIC20.87■□□□□ 0.93
PDE6BP35913 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PDE6BP35913 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.87■□□□□ 0.93
PDE6BP35913 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDE6BP35913 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6BP35913 AC131009.4-201ENST00000624048 1740 ntBASIC20.87■□□□□ 0.93
PDE6BP35913 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PDE6BP35913 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.86■□□□□ 0.93
PDE6BP35913 AC009477.1-201ENST00000452936 217 ntBASIC20.86■□□□□ 0.93
PDE6BP35913 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.86■□□□□ 0.93
PDE6BP35913 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.86■□□□□ 0.93
PDE6BP35913 TP53TG3HP-202ENST00000569755 579 ntBASIC20.86■□□□□ 0.93
PDE6BP35913 AC021097.1-201ENST00000607902 574 ntBASIC20.86■□□□□ 0.93
PDE6BP35913 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE6BP35913 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE6BP35913 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PDE6BP35913 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PDE6BP35913 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6BP35913 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PDE6BP35913 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms