Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
COL8A2P25067 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
COL8A2P25067 AC008894.3-201ENST00000624324 3103 ntBASIC14.45□□□□□ -0.1
COL8A2P25067 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.45□□□□□ -0.1
COL8A2P25067 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
COL8A2P25067 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.45□□□□□ -0.1
COL8A2P25067 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.45□□□□□ -0.1
COL8A2P25067 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.45□□□□□ -0.1
COL8A2P25067 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.45□□□□□ -0.1
COL8A2P25067 AC096734.2-201ENST00000562054 433 ntBASIC14.45□□□□□ -0.1
COL8A2P25067 AC108860.2-201ENST00000562760 2183 ntBASIC14.45□□□□□ -0.1
COL8A2P25067 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.45□□□□□ -0.1
COL8A2P25067 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.45□□□□□ -0.1
COL8A2P25067 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.45□□□□□ -0.1
COL8A2P25067 AL691403.2-201ENST00000618460 490 ntBASIC14.45□□□□□ -0.1
COL8A2P25067 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
COL8A2P25067 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.45□□□□□ -0.1
COL8A2P25067 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
COL8A2P25067 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.45□□□□□ -0.1
COL8A2P25067 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL8A2P25067 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
COL8A2P25067 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.44□□□□□ -0.1
COL8A2P25067 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.44□□□□□ -0.1
COL8A2P25067 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.44□□□□□ -0.1
COL8A2P25067 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.44□□□□□ -0.1
COL8A2P25067 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
COL8A2P25067 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.44□□□□□ -0.1
COL8A2P25067 MCCD1P2-201ENST00000423228 335 ntBASIC14.44□□□□□ -0.1
COL8A2P25067 RPS8P6-201ENST00000426177 609 ntBASIC14.44□□□□□ -0.1
COL8A2P25067 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
COL8A2P25067 PAWRP1-201ENST00000451083 565 ntBASIC14.44□□□□□ -0.1
COL8A2P25067 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.44□□□□□ -0.1
COL8A2P25067 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.44□□□□□ -0.1
COL8A2P25067 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.44□□□□□ -0.1
COL8A2P25067 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.44□□□□□ -0.1
COL8A2P25067 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 AC010507.1-201ENST00000633895 436 ntBASIC14.44□□□□□ -0.1
COL8A2P25067 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.44□□□□□ -0.1
COL8A2P25067 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 AC002310.6-201ENST00000624451 1377 ntBASIC14.44□□□□□ -0.1
COL8A2P25067 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.44□□□□□ -0.1
COL8A2P25067 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL8A2P25067 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.43□□□□□ -0.1
COL8A2P25067 BCAR1-209ENST00000546196 1340 ntBASIC14.43□□□□□ -0.1
COL8A2P25067 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
COL8A2P25067 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.43□□□□□ -0.1
COL8A2P25067 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.43□□□□□ -0.1
COL8A2P25067 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 RHOQP3-201ENST00000437982 621 ntBASIC14.43□□□□□ -0.1
COL8A2P25067 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.43□□□□□ -0.1
COL8A2P25067 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.43□□□□□ -0.1
COL8A2P25067 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COL8A2P25067 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.43□□□□□ -0.1
COL8A2P25067 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
COL8A2P25067 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.43□□□□□ -0.1
COL8A2P25067 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COL8A2P25067 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.43□□□□□ -0.1
COL8A2P25067 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL8A2P25067 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COL8A2P25067 AC022211.2-201ENST00000585075 2527 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms