Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC099343.3-201ENST00000605834 2503 ntBASIC13.16□□□□□ -0.3
RAB4AP20338 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 POM121L13P-201ENST00000422362 380 ntBASIC13.16□□□□□ -0.3
RAB4AP20338 CDCA4P2-201ENST00000441182 718 ntBASIC13.16□□□□□ -0.3
RAB4AP20338 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 AC026185.1-201ENST00000445748 174 ntBASIC13.16□□□□□ -0.3
RAB4AP20338 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
RAB4AP20338 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 AC034236.2-201ENST00000606662 1610 ntBASIC13.16□□□□□ -0.3
RAB4AP20338 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB4AP20338 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB4AP20338 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB4AP20338 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RAB4AP20338 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RAB4AP20338 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 UNC93B4-201ENST00000505679 747 ntBASIC13.15□□□□□ -0.3
RAB4AP20338 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB4AP20338 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB4AP20338 AL445675.2-201ENST00000620291 557 ntBASIC13.15□□□□□ -0.3
RAB4AP20338 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB4AP20338 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
RAB4AP20338 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB4AP20338 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB4AP20338 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB4AP20338 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
RAB4AP20338 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.15□□□□□ -0.31
RAB4AP20338 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB4AP20338 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms