Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL3P19876 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL3P19876 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL3P19876 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL3P19876 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL3P19876 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL3P19876 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL3P19876 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL3P19876 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL3P19876 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL3P19876 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CXCL3P19876 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL3P19876 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.38□□□□□ -0.11
CXCL3P19876 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.38□□□□□ -0.11
CXCL3P19876 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.38□□□□□ -0.11
CXCL3P19876 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 MIR3180-4-201ENST00000582223 153 ntBASIC14.38□□□□□ -0.11
CXCL3P19876 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CXCL3P19876 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CXCL3P19876 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CXCL3P19876 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL3P19876 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL3P19876 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL3P19876 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CXCL3P19876 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCL3P19876 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CXCL3P19876 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
CXCL3P19876 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
CXCL3P19876 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.37□□□□□ -0.11
CXCL3P19876 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CXCL3P19876 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CXCL3P19876 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.37□□□□□ -0.11
CXCL3P19876 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCL3P19876 KRT16P5-201ENST00000455284 522 ntBASIC14.37□□□□□ -0.11
CXCL3P19876 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CXCL3P19876 AP003097.1-201ENST00000530657 1135 ntBASIC14.37□□□□□ -0.11
CXCL3P19876 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CXCL3P19876 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CXCL3P19876 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCL3P19876 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCL3P19876 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms