Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-EP13747 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-EP13747 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-EP13747 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-EP13747 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HLA-EP13747 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HLA-EP13747 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HLA-EP13747 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HLA-EP13747 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HLA-EP13747 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-EP13747 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-EP13747 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
HLA-EP13747 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HLA-EP13747 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-EP13747 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-EP13747 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-EP13747 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-EP13747 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
HLA-EP13747 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-EP13747 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-EP13747 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.25■□□□□ 0.35
HLA-EP13747 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-EP13747 AC027612.4-201ENST00000605371 583 ntBASIC17.25■□□□□ 0.35
HLA-EP13747 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-EP13747 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-EP13747 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-EP13747 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
HLA-EP13747 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-EP13747 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-EP13747 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-EP13747 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HLA-EP13747 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-EP13747 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HLA-EP13747 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-EP13747 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-EP13747 ACTG1P14-201ENST00000446382 1122 ntBASIC17.24■□□□□ 0.35
HLA-EP13747 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-EP13747 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-EP13747 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-EP13747 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-EP13747 MIR3197-201ENST00000582241 73 ntBASIC17.24■□□□□ 0.35
HLA-EP13747 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-EP13747 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-EP13747 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-EP13747 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-EP13747 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-EP13747 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HLA-EP13747 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-EP13747 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-EP13747 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-EP13747 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HLA-EP13747 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-EP13747 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-EP13747 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-EP13747 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HLA-EP13747 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-EP13747 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-EP13747 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-EP13747 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-EP13747 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms