Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RETP07949 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
RETP07949 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RETP07949 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RETP07949 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RETP07949 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RETP07949 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RETP07949 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.24■□□□□ 0.35
RETP07949 TIMM8BP1-201ENST00000452384 211 ntBASIC17.24■□□□□ 0.35
RETP07949 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.24■□□□□ 0.35
RETP07949 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 DUX4L17-201ENST00000557360 1267 ntBASIC17.24■□□□□ 0.35
RETP07949 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.24■□□□□ 0.35
RETP07949 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.24■□□□□ 0.35
RETP07949 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.24■□□□□ 0.35
RETP07949 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RETP07949 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RETP07949 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.24■□□□□ 0.35
RETP07949 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.24■□□□□ 0.35
RETP07949 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RETP07949 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RETP07949 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RETP07949 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.24■□□□□ 0.35
RETP07949 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.24■□□□□ 0.35
RETP07949 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RETP07949 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.23■□□□□ 0.35
RETP07949 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RETP07949 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
RETP07949 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.23■□□□□ 0.35
RETP07949 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 FAM207CP-201ENST00000443486 507 ntBASIC17.23■□□□□ 0.35
RETP07949 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.23■□□□□ 0.35
RETP07949 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
RETP07949 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 AC051619.7-201ENST00000568314 623 ntBASIC17.23■□□□□ 0.35
RETP07949 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.23■□□□□ 0.35
RETP07949 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.23■□□□□ 0.35
RETP07949 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.23■□□□□ 0.35
RETP07949 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
RETP07949 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RETP07949 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.23■□□□□ 0.35
RETP07949 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.23■□□□□ 0.35
RETP07949 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RETP07949 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RETP07949 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RETP07949 PHGDH-209ENST00000641074 1780 ntBASIC17.23■□□□□ 0.35
RETP07949 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.22■□□□□ 0.35
RETP07949 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RETP07949 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.22■□□□□ 0.35
RETP07949 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.22■□□□□ 0.35
RETP07949 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RETP07949 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RETP07949 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.22■□□□□ 0.35
RETP07949 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 AC002056.1-201ENST00000395613 760 ntBASIC17.22■□□□□ 0.35
RETP07949 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RETP07949 ADH5P3-201ENST00000433842 1137 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms