Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TSPAN3O60637 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.62■□□□□ 0.41
TSPAN3O60637 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN3O60637 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TSPAN3O60637 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TSPAN3O60637 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.61■□□□□ 0.41
TSPAN3O60637 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TSPAN3O60637 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.61■□□□□ 0.41
TSPAN3O60637 CXCL1P1-201ENST00000502804 216 ntBASIC17.61■□□□□ 0.41
TSPAN3O60637 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TSPAN3O60637 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.61■□□□□ 0.41
TSPAN3O60637 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.61■□□□□ 0.41
TSPAN3O60637 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TSPAN3O60637 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.61■□□□□ 0.41
TSPAN3O60637 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.61■□□□□ 0.41
TSPAN3O60637 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.61■□□□□ 0.41
TSPAN3O60637 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 AC055717.3-201ENST00000622967 595 ntBASIC17.61■□□□□ 0.41
TSPAN3O60637 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.61■□□□□ 0.41
TSPAN3O60637 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TSPAN3O60637 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.61■□□□□ 0.41
TSPAN3O60637 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.61■□□□□ 0.41
TSPAN3O60637 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN3O60637 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TSPAN3O60637 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.6■□□□□ 0.41
TSPAN3O60637 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 RPSAP43-201ENST00000402237 625 ntBASIC17.6■□□□□ 0.41
TSPAN3O60637 UPF3AP3-201ENST00000420996 769 ntBASIC17.6■□□□□ 0.41
TSPAN3O60637 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.6■□□□□ 0.41
TSPAN3O60637 AC004832.2-201ENST00000426397 482 ntBASIC17.6■□□□□ 0.41
TSPAN3O60637 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.6■□□□□ 0.41
TSPAN3O60637 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.6■□□□□ 0.41
TSPAN3O60637 AC096734.2-201ENST00000562054 433 ntBASIC17.6■□□□□ 0.41
TSPAN3O60637 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.6■□□□□ 0.41
TSPAN3O60637 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.6■□□□□ 0.41
TSPAN3O60637 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 EGFEM1P-202ENST00000431685 1563 ntBASIC17.6■□□□□ 0.41
TSPAN3O60637 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TSPAN3O60637 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
TSPAN3O60637 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.6■□□□□ 0.41
TSPAN3O60637 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN3O60637 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.59■□□□□ 0.41
TSPAN3O60637 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.59■□□□□ 0.41
TSPAN3O60637 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 AC025580.3-201ENST00000617932 1424 ntBASIC17.59■□□□□ 0.41
TSPAN3O60637 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 AC002310.6-201ENST00000624451 1377 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms