Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH7O60245 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDH7O60245 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDH7O60245 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH7O60245 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH7O60245 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PCDH7O60245 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
PCDH7O60245 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDH7O60245 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PCDH7O60245 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH7O60245 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 LINC00982-205ENST00000420957 435 ntBASIC16.35■□□□□ 0.21
PCDH7O60245 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDH7O60245 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH7O60245 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH7O60245 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 FLJ38576-201ENST00000623820 2459 ntBASIC16.35■□□□□ 0.21
PCDH7O60245 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH7O60245 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDH7O60245 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
PCDH7O60245 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDH7O60245 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDH7O60245 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 BX005266.1-201ENST00000473402 457 ntBASIC16.34■□□□□ 0.21
PCDH7O60245 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDH7O60245 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDH7O60245 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDH7O60245 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH7O60245 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDH7O60245 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH7O60245 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PCDH7O60245 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH7O60245 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDH7O60245 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH7O60245 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH7O60245 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH7O60245 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH7O60245 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH7O60245 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDH7O60245 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH7O60245 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH7O60245 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH7O60245 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 RNF216P1-203ENST00000404404 2427 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms