Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 AL139384.1-201ENST00000612143 3047 ntBASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 RCN1P1-201ENST00000400413 996 ntBASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 AP002490.2-201ENST00000524791 560 ntBASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.24■□□□□ 0.35
TCRBV9S1A1TA0A576 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 AC148477.5-201ENST00000625164 1645 ntBASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 BX276092.5-203ENST00000456199 560 ntBASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 PMPCAP1-201ENST00000508114 1576 ntBASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV9S1A1TA0A576 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 INTS4P1-201ENST00000438455 1935 ntBASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 NUS1P1-201ENST00000446295 882 ntBASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 DUX4L17-201ENST00000557360 1267 ntBASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 AL121672.3-201ENST00000608644 468 ntBASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 AC016734.2-201ENST00000624325 1377 ntBASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms