Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 AP001094.4-201ENST00000579008 2176 ntBASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RAI2Q9Y5P3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 RPS15P9-201ENST00000494093 319 ntBASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 AL805961.1-202ENST00000641562 540 ntBASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAI2Q9Y5P3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 AC092053.1-201ENST00000605787 1936 ntBASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 AP002414.1-201ENST00000391405 1147 ntBASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 RPSAP43-201ENST00000402237 625 ntBASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 HTR5BP-201ENST00000430851 1154 ntBASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 AC005593.1-201ENST00000624894 515 ntBASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 PGM5P2-202ENST00000637225 1043 ntBASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAI2Q9Y5P3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAI2Q9Y5P3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms