Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 KRT16P4-201ENST00000453883 522 ntBASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 AC005336.2-201ENST00000593183 939 ntBASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 PCDHB19P-201ENST00000570871 2371 ntBASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 UBALD1-205ENST00000590891 2641 ntBASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 AL845331.1-201ENST00000424978 1190 ntBASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 IFNL4P1-201ENST00000607083 540 ntBASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB3Q9Y5G1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 MINOS1P3-201ENST00000457048 203 ntBASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 FOSL1P1-201ENST00000511041 816 ntBASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AC109462.3-201ENST00000573934 613 ntBASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms