Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT11Q9UKZ1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT11Q9UKZ1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 MTCL1P1-201ENST00000446207 792 ntBASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 NUS1P1-201ENST00000446295 882 ntBASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 KRT17P6-201ENST00000453795 1220 ntBASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 AC104819.1-201ENST00000504587 486 ntBASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 AC074051.2-201ENST00000565115 352 ntBASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 LINC00554-201ENST00000564841 3011 ntBASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT11Q9UKZ1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 PKD1P1-201ENST00000458669 6805 ntBASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 IGHV3-47-201ENST00000425060 335 ntBASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 PRELID1P1-202ENST00000567272 903 ntBASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT11Q9UKZ1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 AC009949.1-201ENST00000623048 1830 ntBASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 RNF216P1-203ENST00000404404 2427 ntBASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT11Q9UKZ1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms