Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 MIR770-201ENST00000390219 98 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 AC005237.2-201ENST00000434368 219 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 AL592309.1-201ENST00000443127 649 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 FAM86C2P-203ENST00000528684 1004 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 RARRES2P8-201ENST00000566335 367 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 AL009183.1-201ENST00000603760 355 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 AC009093.7-201ENST00000623853 1223 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 AC116353.5-201ENST00000638148 1699 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 AC016396.2-201ENST00000562575 1417 ntBASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
FBXO28Q9NVF7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 AL353732.1-201ENST00000569618 1459 ntBASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 AC069335.1-201ENST00000489972 472 ntBASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 AL138688.1-201ENST00000624851 1594 ntBASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.57■□□□□ 0.72
FBXO28Q9NVF7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO28Q9NVF7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 GNAS-203ENST00000306120 1878 ntBASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 AC025678.2-201ENST00000562061 970 ntBASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 FRMD8P1-201ENST00000440433 1524 ntBASIC19.55■□□□□ 0.72
FBXO28Q9NVF7 TOP3BP1-201ENST00000420768 1380 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms