Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 FAM207CP-201ENST00000443486 507 ntBASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 AC069120.2-201ENST00000524091 540 ntBASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 AP000842.3-202ENST00000569238 1080 ntBASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRMT13Q9NUP7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 RNU1-129P-201ENST00000384064 167 ntBASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 AC092580.3-201ENST00000430932 139 ntBASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 AL512638.1-201ENST00000457493 794 ntBASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 U1.21-201ENST00000580816 167 ntBASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 AC027307.2-201ENST00000591252 911 ntBASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 AC008267.7-201ENST00000624570 1194 ntBASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
TRMT13Q9NUP7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.64■□□□□ 0.58
TRMT13Q9NUP7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.64■□□□□ 0.58
TRMT13Q9NUP7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRMT13Q9NUP7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRMT13Q9NUP7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 HCG4-201ENST00000418983 998 ntBASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 AL031055.1-201ENST00000606362 631 ntBASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms