Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 FOXO1B-201ENST00000504678 1527 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AC091046.1-201ENST00000331871 207 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 BCRP2-202ENST00000447763 634 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 BCRP6-201ENST00000510112 632 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 BCRP7-201ENST00000511549 544 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AC233724.13-201ENST00000598383 410 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AL133215.2-201ENST00000609242 977 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AC128714.1-201ENST00000637035 887 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AC046185.3-201ENST00000623228 1824 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AP000812.2-201ENST00000538934 718 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 AC123567.1-201ENST00000548294 1261 ntBASIC15.68■□□□□ 0.1
CHD8Q9HCK8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.68■□□□□ 0.1
CHD8Q9HCK8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 AP001258.2-201ENST00000529891 490 ntBASIC15.67■□□□□ 0.1
CHD8Q9HCK8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD8Q9HCK8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 AC002558.1-201ENST00000488906 803 ntBASIC15.66■□□□□ 0.1
CHD8Q9HCK8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 RRP7BP-205ENST00000566851 833 ntBASIC15.66■□□□□ 0.1
CHD8Q9HCK8 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 AL031055.1-201ENST00000606362 631 ntBASIC15.66■□□□□ 0.1
CHD8Q9HCK8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 AC091271.1-201ENST00000611877 1162 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms