Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL118508.1-201ENST00000613502 2345 ntBASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 KRT18P31-201ENST00000506277 1292 ntBASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 AL139288.1-201ENST00000623748 933 ntBASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC40Q9H9A6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 BX005266.1-201ENST00000473402 457 ntBASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 AL022326.1-202ENST00000641533 845 ntBASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC40Q9H9A6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 TSPY19P-201ENST00000418461 509 ntBASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 TSPY18P-201ENST00000441642 509 ntBASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 PRELID1P1-202ENST00000567272 903 ntBASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC40Q9H9A6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 AL356309.3-201ENST00000624132 1934 ntBASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC40Q9H9A6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms