Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AC117947.1-201ENST00000427448 529 ntBASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AC063952.2-201ENST00000498792 1227 ntBASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AP003041.3-201ENST00000527151 707 ntBASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 WWOX-216ENST00000569818 525 ntBASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AL138966.2-201ENST00000621997 464 ntBASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 AC006116.8-202ENST00000587620 1550 ntBASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 AC008556.1-201ENST00000610908 2040 ntBASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 TSPY5P-201ENST00000426936 936 ntBASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 YBX1P2-201ENST00000489612 999 ntBASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms