Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LIMD2Q9BT23 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LIMD2Q9BT23 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC10.28□□□□□ -0.76
LIMD2Q9BT23 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LIMD2Q9BT23 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC10.28□□□□□ -0.76
LIMD2Q9BT23 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC10.28□□□□□ -0.76
LIMD2Q9BT23 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC10.27□□□□□ -0.76
LIMD2Q9BT23 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
LIMD2Q9BT23 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
LIMD2Q9BT23 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LIMD2Q9BT23 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC10.27□□□□□ -0.76
LIMD2Q9BT23 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
LIMD2Q9BT23 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LIMD2Q9BT23 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
LIMD2Q9BT23 AC006116.8-202ENST00000587620 1550 ntBASIC10.27□□□□□ -0.76
LIMD2Q9BT23 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AC073508.3-201ENST00000619697 1419 ntBASIC10.27□□□□□ -0.77
LIMD2Q9BT23 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AC022211.2-201ENST00000585075 2527 ntBASIC10.27□□□□□ -0.77
LIMD2Q9BT23 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 HBZP1-201ENST00000354915 429 ntBASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 MIR662-201ENST00000384847 95 ntBASIC10.27□□□□□ -0.77
LIMD2Q9BT23 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AL671277.2-201ENST00000458060 996 ntBASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AC112698.1-201ENST00000510299 916 ntBASIC10.27□□□□□ -0.77
LIMD2Q9BT23 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 MED25-212ENST00000618715 1467 ntTSL 5 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AC133963.1-201ENST00000504166 1679 ntBASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 AL645608.8-201ENST00000606034 2086 ntBASIC10.27□□□□□ -0.77
LIMD2Q9BT23 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LIMD2Q9BT23 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 HLA-J-201ENST00000462773 1622 ntBASIC10.26□□□□□ -0.77
LIMD2Q9BT23 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 AL645929.1-201ENST00000420084 975 ntBASIC10.26□□□□□ -0.77
LIMD2Q9BT23 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC10.26□□□□□ -0.77
LIMD2Q9BT23 AC063952.2-201ENST00000498792 1227 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms