Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.38□□□□□ -0.27
TRGV9Q99603 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.38□□□□□ -0.27
TRGV9Q99603 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.38□□□□□ -0.27
TRGV9Q99603 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV9Q99603 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.38□□□□□ -0.27
TRGV9Q99603 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TRGV9Q99603 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.38□□□□□ -0.27
TRGV9Q99603 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV9Q99603 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TRGV9Q99603 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRGV9Q99603 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV9Q99603 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV9Q99603 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRGV9Q99603 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV9Q99603 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV9Q99603 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV9Q99603 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRGV9Q99603 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV9Q99603 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.38□□□□□ -0.27
TRGV9Q99603 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRGV9Q99603 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.37□□□□□ -0.27
TRGV9Q99603 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 LINC01023-201ENST00000606054 436 ntBASIC13.37□□□□□ -0.27
TRGV9Q99603 AC073592.5-201ENST00000624854 528 ntBASIC13.37□□□□□ -0.27
TRGV9Q99603 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
TRGV9Q99603 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRGV9Q99603 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TRGV9Q99603 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 CYP2T1P-202ENST00000641596 2535 ntBASIC13.37□□□□□ -0.27
TRGV9Q99603 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.37□□□□□ -0.27
TRGV9Q99603 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV9Q99603 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV9Q99603 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRGV9Q99603 AC006449.5-201ENST00000610658 2098 ntBASIC13.36□□□□□ -0.27
TRGV9Q99603 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV9Q99603 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TRGV9Q99603 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV9Q99603 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV9Q99603 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV9Q99603 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV9Q99603 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.36□□□□□ -0.27
TRGV9Q99603 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRGV9Q99603 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV9Q99603 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV9Q99603 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms